Category: bioinformatics

PathBLAST is a network alignment and search tool for comparing protein interaction networks across species to identify protein pathways and…

A primer is a short synthetic oligonucleotide which is used in many molecular techniques from PCR to DNA sequencing. These…

The concept of quaternary structure was first put forward by Bernal in 1958. Quaternay structure is defined as the level…

Immunology databases provide more detailed information on immunologically relevant molecules, systems and processes. They are typically annotated by experts and…

The Human Genome Landmarks poster is a 24″ by 36″ wall poster that lists selected genes, traits, and disorders associated…

1.Go to the MEME Website(http://meme.sdsc.edu/meme/intro.html) and click on Discover Motifs.2. Fill in the following fields in the MEME input forma.…

The biobar project is a bioinformatics power-browsing toolbar for Mozilla-based browsers including Firefox/Flock/Mozilla/Netscape and Seamonkey. The primary advantage of this…

Abstract from Tim Hubbard talk:Thirty times bigger than the worm genome that we were only just getting to grips with…

Computational docking is a technique with which one predicts the 3D structure of the complex between two or more molecules.…

A database specialized in membrane proteins structures determined by x-ray and electron diffraction with links to the Protein Data Bank…

Not all the proteins have definite 3D structure.There are partially and wholly unstructured proteins have been identified in all kingdoms…

DNA can be represented in a variety of ways, which can provide different visual perspectives of molecular structure.This Musical Atlas…

The Structural Classification of RNA (SCOR) is a database designed to provide a comprehensive perspective and understanding of RNA motif…

Human Protein Reference Database (HPRD) that integrates information relevant to the function of human proteins in health and disease. Data…

Few suggestion for good biological database design (from the NAR database issue 2007-Editorial). Here is the summary 1.The quality, quantity…

Decoys ‘R’Us database contains a wide variety of decoys generated by different methods with the aim of fooling scoring functions.…

EMBL-EBI launched its new website interface with powerful search engine called he “EB-eye”, a powerful search engine allowing instant searches…

If your protein sequence shows significant homology to another protein of known three-dimensional structure, then a fairly accurate model of…

Partial string search Ligand name searching supports partial string matches. For example, searching for ‘benz’ will return all structures that…

To compare only two sequences that are already known to be homologous, coming from related species ‘BLAST 2 Sequence tool…