bioinformatics-DNA, protein

The Microsecond Timescale Dynamics of HIV-1 Envelope Glycoprotein and Implications for Vaccine Design

February 6, 2024 Off By admin
Shares

Published in: Science Advances

A study published in Science Advances explores the microsecond timescale dynamics of the HIV-1 Envelope (Env) glycoprotein, providing insights into its structural rearrangements during the host cell fusion process. The research, conducted by investigators from the Duke Human Vaccine Institute (DHVI), unveils a brief structural transition in the trimer apex that occurs within microseconds and plays a crucial role in controlling the Env conformation. The findings have implications for vaccine design, particularly in understanding the dynamic nature of Env and its potential for developing broadly neutralizing antibodies.

Key Points:

  1. Time-Resolved Structural Analysis: The study utilized time-resolved, temperature-jump small-angle x-ray scattering to monitor structural rearrangements in an HIV-1 Env SOSIP ectodomain construct with microsecond precision. This experimental approach allowed the observation of dynamic structural changes in the Env glycoprotein at the microsecond timescale.
  2. Detection of Structural Transitions: Two distinct Env variants were investigated, revealing a transition with a time constant in the hundreds of microseconds range, correlating with known Env structure rearrangements during the host cell fusion process. Additionally, a previously unknown structural transition was observed with a time constant below 10 μs, involving an order-to-disorder transition in the trimer apex.
  3. Engineered Env SOSIP Construct: Building on the insights gained from the microsecond timescale dynamics, the researchers engineered an Env SOSIP construct that locks the trimer in the prefusion closed state by introducing disulfide bonds between adjacent protomers. This design aimed to stabilize the prefusion state and prevent the structural transitions associated with host cell fusion.
  4. Implications for Vaccine Design: The study highlights the importance of considering microsecond timescale dynamics in understanding and controlling the conformational changes of the HIV-1 Env glycoprotein. The engineered Env SOSIP construct provides a potential strategy for designing immunogens that stabilize the prefusion closed state, with implications for developing vaccines against HIV-1.
  5. Dynamic Nature of Env Glycoprotein: The research challenges previous assumptions about the stability of the Env structure and emphasizes the dynamic nature of the trimer apex, which undergoes rapid transitions during the early stages of infection.
  6. Designing Antibodies to Target Specific Structures: The findings suggest that understanding the microsecond timescale dynamics of HIV-1 Env could guide the design of antibodies that specifically target transient structures involved in the viral entry process, opening avenues for developing broadly neutralizing antibodies for an AIDS vaccine.

Conclusion:

The Science Advances article contributes valuable insights into the microsecond timescale dynamics of the HIV-1 Envelope glycoprotein, shedding light on its structural transitions during host cell fusion. The study’s findings provide a foundation for reevaluating vaccine design strategies by considering the dynamic nature of Env and exploring ways to stabilize specific conformations that are relevant for developing effective HIV-1 vaccines.

Shares