Sequence Manipulation Suite for sequence analysis
September 27, 2007
The Sequence Manipulation Suite (SMS) is a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences.
The SMS is divided into different sections like
1.Format conversion – For combining and coverting from one format to another format
2.sequence analysis – It has range of programmes for analysing the sequences by pairwise alignment, translating, finding patterns etc
3.Sequence Figures – This section has programmes like grouping the protein, colouring the sequences etc
4.Random sequences – It contains programmes like mutating the sequences, shfulling etc
5.Miscallaneous – It contains references of IUPAC codes, genetic codes.
It can be mirrored on your website or it can be run locally on your computer.
- To mirror the Sequence Manipulation Suite: Extract sms2.zip or sms2.tar.gz and place the resulting sms2 directory into a directory from which your server will serve HTML files.
- To run the Sequence Manipulation Suite locally: Extract sms2.zip or sms2.tar.gz and load index.html from the resulting sms2 directory into your web browser.