Exploring Protein Information and Analysis with UniProt
This outline provides a comprehensive overview of UniProt, including data retrieval, analysis, integration with other tools, real-world applications, and future…
Bioinformatics, Genomics, Proteomics and Transcriptomics
This outline provides a comprehensive overview of UniProt, including data retrieval, analysis, integration with other tools, real-world applications, and future…
Introduction to Homology Modeling Homology modeling, also known as comparative modeling, is a computational method used to predict the three-dimensional…
Course Description: This course provides an introduction to PyMOL, a powerful tool for visualizing and analyzing molecular structures in 3D.…
Definition and brief history of NGS Next-generation sequencing (NGS), also known as high-throughput sequencing, refers to a set of modern…
Introduction to Multiple Sequence Alignment (MSA) Multiple Sequence Alignment (MSA) is a fundamental technique in bioinformatics used to align three…
Gene specific information using NCBI and genome viewers Gene Web resources: NCBI database: https://www.ncbi.nlm.nih.gov/ NCBI Gene database: https://www.ncbi.nlm.nih.gov/gene UCSC Genome…
Using Protein-Protein Interaction Databases Links: String DB: https://string-db.org/ IntAct: https://www.ebi.ac.uk/intact/home BioGRID: https://thebiogrid.org/ STRING: Database of known & predicted protein-protein interactions.…
Relevant websites: Protein Information Tutorial SMART (normal mode): http://smart.embl-heidelberg.de/ SMART (batch mode): http://smart.embl-heidelberg.de/smart/batch.pl HMMER search: https://www.ebi.ac.uk/Tools/hmmer/ InterProScan: https://www.ebi.ac.uk/interpro/ DTU prediction…
Managing lists of data using Excel and online tools Websites: EBI BioMart: http://useast.ensembl.org/index.html then click on the BioMart link Tutorial…
This tutorial aims to provide a comprehensive understanding of NCBI BLAST, covering basic to advanced features and practical applications. Participants…