January 12, 2007
Specialized Immunology databases
Immunology databases provide more detailed information on immunologically relevant molecules, systems and processes. They are typically annotated by experts and…
Category: bioinformatics
January 11, 2007
Get a free copy of the Human Genome Landmarks poster!
The Human Genome Landmarks poster is a 24″ by 36″ wall poster that lists selected genes, traits, and disorders associated…
January 11, 2007
Motifs discovery in groups of related DNA/protein sequences
1.Go to the MEME Website(http://meme.sdsc.edu/meme/intro.html) and click on Discover Motifs.2. Fill in the following fields in the MEME input forma.…
January 10, 2007
Toolbar for browsing biological data and databases
The biobar project is a bioinformatics power-browsing toolbar for Mozilla-based browsers including Firefox/Flock/Mozilla/Netscape and Seamonkey. The primary advantage of this…
January 10, 2007
Keeping up with the Human genome – Tim Hubbard
Abstract from Tim Hubbard talk:Thirty times bigger than the worm genome that we were only just getting to grips with…
January 9, 2007
Computational docking
Computational docking is a technique with which one predicts the 3D structure of the complex between two or more molecules.…
January 9, 2007
Membrane Proteins Structure database
A database specialized in membrane proteins structures determined by x-ray and electron diffraction with links to the Protein Data Bank…
January 8, 2007
Proteins that lack definite 3D structure
Not all the proteins have definite 3D structure.There are partially and wholly unstructured proteins have been identified in all kingdoms…
January 7, 2007
Visualize DNA structure through Music
DNA can be represented in a variety of ways, which can provide different visual perspectives of molecular structure.This Musical Atlas…
January 7, 2007
Database for RNA structural classification
The Structural Classification of RNA (SCOR) is a database designed to provide a comprehensive perspective and understanding of RNA motif…
January 5, 2007
Human Protein Reference Database
Human Protein Reference Database (HPRD) that integrates information relevant to the function of human proteins in health and disease. Data…
January 5, 2007
Few suggestions for good biological database design
Few suggestion for good biological database design (from the NAR database issue 2007-Editorial). Here is the summary 1.The quality, quantity…
January 5, 2007
A database of incorrect Protein conformations
Decoys ‘R’Us database contains a wide variety of decoys generated by different methods with the aim of fooling scoring functions.…
January 4, 2007
Tips to use EBI new search interface-“EB-eye”
EMBL-EBI launched its new website interface with powerful search engine called he “EB-eye”, a powerful search engine allowing instant searches…
January 4, 2007
Build Protein Model from your sequence in a easy way
If your protein sequence shows significant homology to another protein of known three-dimensional structure, then a fairly accurate model of…
January 4, 2007
Ligand searching in Protein Data Bank (PDB)
Partial string search Ligand name searching supports partial string matches. For example, searching for ‘benz’ will return all structures that…
January 4, 2007
Aligning two sequences
To compare only two sequences that are already known to be homologous, coming from related species ‘BLAST 2 Sequence tool…
January 4, 2007
PubMed Search Tips
PubMed was developed by the National Center for Biotechnology Information (NCBI) at the National Library of Medicine (NLM) as part…
October 10, 2006
Ace of (data)base
A biological database is a large, organized body of persistent data, usually associated with computerized software designed to update, query,…
October 9, 2006
Impact of human genome project
The Human Genome Project (HGP) is a project to map and sequence the 3 billion nucleotides contained in the human…